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http://nature.berkeley.edu/biometlab/Lectures/Baldocchi%20Scaling%20Information%20from%20Chloroplast%20to%20the%20Globe.pdf
Landscape: 1‐100 km Canopy: 100‐1000 m Plant: 1‐10 m Leaf: 0.01‐0.1 m Stomata: 510‐ m Bacteria/Chloroplast: 610‐ m
https://www.biorxiv.org/content/10.1101/665869v2.full.pdf
the A. thaliana chloroplast genome at 154kbp is more than 800times smaller [23]. Each single chloroplast contains several hundred copies of its genome [24, 25]. Therefore, many plant core genome sequencing projects contain reads that originate from chloroplasts as a by-product and permit the assembly of chloroplast genomes.
https://www.biorxiv.org/content/10.1101/665869v1.full.pdf
Freudenthal et al. RESEARCH The landscape of chloroplast genome assembly tools Jan A Freudenthal1,2y, Simon Pfa 1,3y, Niklas Terhoeven1,2, Arthur Korte1, Markus J Ankenbrand1,2,3^ and Frank F orster1,3,4*^ *Correspondence: [email protected] 1Center for Computational and Theoretical Biology, University of
https://www.researchgate.net/publication/333811709_The_landscape_of_chloroplast_genome_assembly_tools
Jun 16, 2019 · The landscape of chloroplast genome assembly. tools. Jan A Freudenthal 1, 2 ... hours (figure 1). Some assemblies failed to finish within the time-limit we set (48 h). On average the.Estimated Reading Time: 6 mins
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-02153-6
Sep 28, 2020 · Chloroplasts are intracellular organelles that enable plants to conduct photosynthesis. They arose through the symbiotic integration of a prokaryotic cell into an eukaryotic host cell and still contain their own genomes with distinct genomic information. Plastid genomes accommodate essential genes and are regularly utilized in biotechnology or phylogenetics.Cited by: 4
https://designcenter.illinois.edu/thecenter
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https://acsess.onlinelibrary.wiley.com/doi/full/10.1002/agj2.20499
Oct 20, 2020 · In the present research, chloroplast genomes (cp genome) of three wetland plants namely, Cyperus alternifolius L., Thalia dealbata Fraser, and Canna indica L. were examined. The cp genomes of these species were sampled and sequenced using Illumina HiSeq platform with a 300-bp paired-end sequencing followed by the analysis of codon usage pattern.
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